BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009E06LP1|AL426046
(824 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1105 569 e-162
>3x_Contig1105
Length = 3123
Score = 569 bits (287), Expect = e-162
Identities = 297/301 (98%)
Strand = Plus / Plus
Query: 524 atacacatggttcatcaaatcctttaggtgttacaggtaatttagatagattaccaatgc 583
||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct: 2 atacacatggttcatcaaatcctttaggttttacaggtaaattagatagattaccaatgc 61
Query: 584 atggttactttatttttmaagatttaattactgtatttgtattcttattcttcttctcat 643
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 62 atggttactttatttttaaagatttaattactgtatttgtattcttattcttcttctctt 121
Query: 644 tatttgtattcttctcacctaatacaatgggacatccagataactatattcctggtaatc 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tatttgtattcttctcacctaatacaatgggacatccagataactatattcctggtaatc 181
Query: 704 cattagttacacctgcatctattgtaccagaatgatatttattaccattctatgcaattt 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cattagttacacctgcatctattgtaccagaatgatatttattaccattctatgcaattt 241
Query: 764 taagatcagtacctgataaattattaggagtattagctatgtttggtgctattttaattt 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 taagatcagtacctgataaattattaggagtattagctatgtttggtgctattttaattt 301
Query: 824 t 824
|
Sbjct: 302 t 302
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7695
Number of Sequences: 1807
Number of extensions: 7695
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 824
length of database: 10,358,551
effective HSP length: 16
effective length of query: 808
effective length of database: 10,329,639
effective search space: 8346348312
effective search space used: 8346348312
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)